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<!DOCTYPE article PUBLIC "-//NLM//DTD Journal Publishing with OASIS Tables v3.0 20080202//EN" "journalpub-oasis3.dtd">
<article xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:oasis="http://docs.oasis-open.org/ns/oasis-exchange/table" xml:lang="en" dtd-version="3.0" article-type="research-article"><?xmltex \bartext{Research article}?>
  <front>
    <journal-meta><journal-id journal-id-type="publisher">ESD</journal-id><journal-title-group>
    <journal-title>Earth System Dynamics</journal-title>
    <abbrev-journal-title abbrev-type="publisher">ESD</abbrev-journal-title><abbrev-journal-title abbrev-type="nlm-ta">Earth Syst. Dynam.</abbrev-journal-title>
  </journal-title-group><issn pub-type="epub">2190-4987</issn><publisher>
    <publisher-name>Copernicus Publications</publisher-name>
    <publisher-loc>Göttingen, Germany</publisher-loc>
  </publisher></journal-meta>
    <article-meta>
      <article-id pub-id-type="doi">10.5194/esd-14-399-2023</article-id><title-group><article-title>How does the phytoplankton–light feedback affect<?xmltex \hack{\break}?> the marine <inline-formula><mml:math id="M1" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> inventory?</article-title><alt-title>How does the phytoplankton–light feedback affect the marine <inline-formula><mml:math id="M2" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> inventory?</alt-title>
      </title-group><?xmltex \runningtitle{How does the phytoplankton--light feedback affect the marine {$\chem{N_{{2}}O}$} inventory?}?><?xmltex \runningauthor{S.~Berthet et al.}?>
      <contrib-group>
        <contrib contrib-type="author" corresp="yes" rid="aff1">
          <name><surname>Berthet</surname><given-names>Sarah</given-names></name>
          <email>sarah.berthet@meteo.fr</email>
        <ext-link>https://orcid.org/0000-0001-5782-2855</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Jouanno</surname><given-names>Julien</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-7750-060X</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Séférian</surname><given-names>Roland</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-2571-2114</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3">
          <name><surname>Gehlen</surname><given-names>Marion</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-9688-0692</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff4">
          <name><surname>Llovel</surname><given-names>William</given-names></name>
          
        </contrib>
        <aff id="aff1"><label>1</label><institution>CNRM, Université de Toulouse, Météo-France, CNRS, Toulouse, France</institution>
        </aff>
        <aff id="aff2"><label>2</label><institution>LEGOS, Université de Toulouse, IRD, CNRS, CNES, UPS, Toulouse, France</institution>
        </aff>
        <aff id="aff3"><label>3</label><institution>LSCE, Université Paris-Saclay, Institut Pierre Simon Laplace, Gif-Sur-Yvette, France</institution>
        </aff>
        <aff id="aff4"><label>4</label><institution>LOPS, CNRS/University of Brest/IFREMER/IRD, Brest, France</institution>
        </aff>
      </contrib-group>
      <author-notes><corresp id="corr1">Sarah Berthet (sarah.berthet@meteo.fr)</corresp></author-notes><pub-date><day>12</day><month>April</month><year>2023</year></pub-date>
      
      <volume>14</volume>
      <issue>2</issue>
      <fpage>399</fpage><lpage>412</lpage>
      <history>
        <date date-type="received"><day>30</day><month>June</month><year>2022</year></date>
           <date date-type="accepted"><day>27</day><month>February</month><year>2023</year></date>
           <date date-type="rev-recd"><day>17</day><month>February</month><year>2023</year></date>
           <date date-type="rev-request"><day>22</day><month>August</month><year>2022</year></date>
      </history>
      <permissions>
        <copyright-statement>Copyright: © 2023 Sarah Berthet et al.</copyright-statement>
        <copyright-year>2023</copyright-year>
      <license license-type="open-access"><license-p>This work is licensed under the Creative Commons Attribution 4.0 International License. To view a copy of this licence, visit <ext-link ext-link-type="uri" xlink:href="https://creativecommons.org/licenses/by/4.0/">https://creativecommons.org/licenses/by/4.0/</ext-link></license-p></license></permissions><self-uri xlink:href="https://esd.copernicus.org/articles/14/399/2023/esd-14-399-2023.html">This article is available from https://esd.copernicus.org/articles/14/399/2023/esd-14-399-2023.html</self-uri><self-uri xlink:href="https://esd.copernicus.org/articles/14/399/2023/esd-14-399-2023.pdf">The full text article is available as a PDF file from https://esd.copernicus.org/articles/14/399/2023/esd-14-399-2023.pdf</self-uri>
      <abstract><title>Abstract</title>

      <p id="d1e167">The phytoplankton–light feedback (PLF) describes the interaction between
phytoplankton biomass and the downwelling shortwave radiation entering the
ocean. The PLF allows the simulation of differential heating across the ocean
water column as a function of phytoplankton concentration. Only one third of
the Earth system models contributing to the 6th phase of the Coupled
Model Intercomparison Project (CMIP6) include a complete representation of
the PLF. In other models, the PLF is either approximated by a prescribed
climatology of chlorophyll or not represented at all. Consequences of an
incomplete representation of the PLF on the modelled biogeochemical state
have not yet been fully assessed and remain a source of multi-model
uncertainty in future projection. Here, we evaluate within a coherent
modelling framework how representations of the PLF of varying complexity
impact ocean physics and ultimately marine production of nitrous oxide
(<inline-formula><mml:math id="M3" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula>), a major greenhouse gas. We exploit global sensitivity
simulations at 1<inline-formula><mml:math id="M4" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> horizontal resolution over the last 2 decades
(1999–2018), coupling ocean, sea ice and marine biogeochemistry. The
representation of the PLF impacts ocean heat uptake and temperature of the
first 300 m of the tropical ocean. Temperature anomalies due to an
incomplete PLF representation drive perturbations of ocean stratification,
dynamics and oxygen concentration. These perturbations translate into
different projection pathways for <inline-formula><mml:math id="M5" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> production depending on the
choice of the PLF representation. The oxygen concentration in the North
Pacific oxygen-minimum zone is overestimated in model runs with an
incomplete representation of the PLF, which results in an underestimation of
local <inline-formula><mml:math id="M6" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> production. This leads to important regional differences of
sea-to-air <inline-formula><mml:math id="M7" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> fluxes: fluxes are enhanced by up to 24 % in the South
Pacific and South Atlantic subtropical gyres but reduced by up to 12 % in
oxygen-minimum zones of the Northern Hemisphere. Our results, based on a
global ocean–biogeochemical model at CMIP6 state-of-the-art level, shed light on
current uncertainties in modelled marine nitrous oxide budgets in climate
models.</p>
  </abstract>
    
<funding-group>
<award-group id="gs1">
<funding-source>Horizon 2020</funding-source>
<award-id>101003536</award-id>
</award-group>
</funding-group>
</article-meta>
  </front>
<body>
      

      
      </body>
    <back><notes notes-type="specialsection"><title>Highlights</title>
    

      <p id="d1e238"><list list-type="bullet">
        <?xmltex \notforhtml{\item[~]}?>
        <list-item>

      <p id="d1e245">Forced ocean–biogeochemical simulations reveal that marine production of
nitrous oxide is sensitive to the representation of the phytoplankton–light
feedback.</p>
        </list-item>
        <list-item>

      <p id="d1e251">The phytoplankton–light feedback perturbs the accumulation of heat and the
ocean dynamics, which drive changes in nitrous oxide production patterns.</p>
        </list-item>
        <list-item>

      <p id="d1e257">An incomplete phytoplankton–light feedback overestimates sea-to-air
N<inline-formula><mml:math id="M8" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O fluxes by up to 24 % in subtropical gyres and reduces them by up
to 12 % in oxygen-minimum zones.</p>
        </list-item>
      </list></p>
  </notes>
<sec id="Ch1.S1" sec-type="intro">
  <label>1</label><title>Introduction</title>
      <p id="d1e279">Feedbacks between the physical, biogeochemical or ecosystem components of
the ocean can trigger abrupt system changes (Heinze et al., 2021). At
present, the interactive phytoplankton–light feedback (PLF) is the only
coupling in Earth system models between modelled marine biogeochemistry and
ocean dynamics (Séférian et al., 2020). It implies that the
chlorophyll (CHL) produced by the biogeochemical model is used to determine
the fraction of shortwave<?pagebreak page400?> radiation penetrating ocean surface waters. In
this case, the CHL concentration profile used to approximate the influence
of plankton biomass on the vertical redistribution of heat in the upper
ocean is consistent with the one used to compute biogeochemical cycling.</p>
<sec id="Ch1.S1.SS1">
  <label>1.1</label><title>Phytoplankton–light feedback (PLF)</title>
      <p id="d1e289">Since the first observational evidence on how suspended matter in surface
waters will impact light absorption by the ocean and change the radiative
imbalance within the mixed layer (Kahru et al., 1993), this biophysical
interaction has been gradually included to ocean models. Gildor and Naik
(2005) highlighted the importance of considering monthly variations of CHL
to capture the first-order effect of marine biota on light penetration in
ocean models. Adding light–CHL interactions to numerical simulations affects
oceanic processes over a wide range of spatial and temporal scales. Enabling
a phytoplankton–light interaction modifies the hydrodynamics of the water
column (Edwards et al., 2001, 2004), the intensity of the
spring bloom in subpolar regions (Oschlies, 2004), the maintenance of the
Pacific cold tongue (Anderson et al., 2007), the seasonality of the Arctic
Ocean (Lengaigne et al., 2009), the strength of the tropical Pacific annual
cycle, the ENSO variability (Timmermann and Jin, 2002; Marzeion
et al., 2005), the northward extension of the meridional overturning
circulation (Patara et al., 2012) and the cooling of the Atlantic and
Peru–Chili upwelling systems (Hernandez et al., 2017; Echevin et al., 2021).</p>
      <p id="d1e292">However, the mean effect of the PLF on sea surface temperature has been
argued to depend on the numerical framework (forced ocean versus coupled
ocean–atmosphere models). The conflicting results reported in the literature
were mainly due to diverging bio-optical protocols among models rather than the inclusion of air–sea coupling. According to Park et al. (2014),
atmosphere–ocean coupling amplifies the magnitude of PLF-induced changes
without altering the sign of the response obtained in ocean-only
simulations. Two main causes were put forward to explain the sign of the
final heat perturbation: either an indirect dynamical response (Murtugudde
et al., 2002; Löptien et al., 2009) or a direct thermal effect (Mignot
et al., 2013; Hernandez et al., 2017). Hernandez et al. (2017) further
distinguished a local from a remote thermal effect by highlighting the
important role played by the advection of offshore CHL-induced cold
anomalies in the Benguela upwelling waters. The interplay of these
mechanisms is regionally variable (Park et al., 2014). Despite the diversity
of modelled responses, a consensus emerges on the first-order effect of PLF
on the ocean physics, which is to perturb the ocean thermal structure
(Nakamoto et al., 2001; Murtugudde et al., 2002; Oschlies, 2004; Manizza et
al., 2005, 2008; Anderson et al., 2007; Lengaigne et al., 2007; Gnanadesikan
and Anderson, 2009; Löptien et al., 2009; Patara et al., 2012; Mignot et
al., 2013; Hernandez et al., 2017). By trapping more heat at the ocean
surface in eutrophic regions, such as coastal or equatorial upwelling
areas, the presence of phytoplankton initially increases the surface
warming. Confining heat at the surface leads to less heat penetrating the
subsurface. In some cases, the advection and upwelling of subsurface cold
anomalies can lead to remote cooling effects (Hernandez et al., 2017;
Echevin et al., 2022). Dynamical readjustment in response to perturbations
in thermal structure has also been shown to have a cooling effect by
increasing upwelling of cold water to the ocean surface (Manizza et al., 2005; Marzeion et al., 2005; Nakamoto et al., 2001; Löptien et al.,
2009; Lengaigne et al., 2007; Park et al., 2014). Because these effects
depend on upper-ocean stratification, an important role is attributed to
modelled seasonal deepening of the mixed layer, as it determines the
intensity of the underlying temperature anomaly and its vertical movement to
the surface. In other terms, whatever the temporality of the causal chain,
changes in the PLF representation are expected to both perturb the ocean
heat uptake and trigger perturbations of both the water column
stratification and associated ocean dynamics.</p>
</sec>
<sec id="Ch1.S1.SS2">
  <label>1.2</label><?xmltex \opttitle{This study: implications for {$\protect\chem{N_{{2}}O}$} budget uncertainties}?><title>This study: implications for <inline-formula><mml:math id="M9" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> budget uncertainties</title>
      <p id="d1e317">Nitrous oxide (<inline-formula><mml:math id="M10" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula>) is a major ozone-depleting substance (Ravishankara
et al., 2009; Freing et al., 2012) and a potent greenhouse gas, whose global
warming potential is 265–298 times that of <inline-formula><mml:math id="M11" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> for a 100-year timescale
(Myhre et al., 2013). The spatial coherence between marine productive areas
and observed hot-spots of <inline-formula><mml:math id="M12" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> production leads one to question the impact
of an incomplete representation of the PLF on the simulated <inline-formula><mml:math id="M13" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula>
inventory. Recent observational studies highlight that <inline-formula><mml:math id="M14" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> production
is high in low-oxygen tropical regions and cold upwelling waters
(Arévalo-Martínez et al., 2017, 2019; Yang et al., 2020; Wilson et al.,
2020). <inline-formula><mml:math id="M15" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> becomes increasingly saturated in surface waters of
equatorial upwelling regions due to the upward advection of <inline-formula><mml:math id="M16" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula>-rich
waters (Arévalo-Martínez et al., 2017). Regions known to account
for the most productive areas of the ocean spatially coincide with highest
<inline-formula><mml:math id="M17" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> production: 64 % of the annual <inline-formula><mml:math id="M18" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> flux occurs in the
tropics, and 20 % occurs in coastal upwelling systems that occupy less than 3 %
of the ocean area (Yang et al., 2020).</p>
      <p id="d1e436">Despite recent advances, a large range of uncertainties still surrounds
oceanic <inline-formula><mml:math id="M19" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> emissions, as large areas of both the open and coastal ocean
remain undersampled by observations (Wilson et al., 2020). In particular,
the paucity of observational data over key source regions contributes to
increased uncertainties. The recent global budget of Tian et al. (2020)
estimates natural sources from soils and oceans to have contributed up to
57 % to the total <inline-formula><mml:math id="M20" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> emissions between 2007 and 2016, with the ocean
flux reaching 3.4 (2.5–4.3) <inline-formula><mml:math id="M21" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">Tg</mml:mi><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi mathvariant="normal">N</mml:mi><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msup><mml:mi mathvariant="normal">yr</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>. A large uncertainty range is
associated with the ocean flux estimate, as it is based on outputs from only a
small number of global ocean–biogeochemical models. Very<?pagebreak page401?> few climate models,
even in the current CMIP6 (Coupled Model Intercomparison Project phase 6) generation, include emissions (and, beforehand, a
complete representation of N cycling) of <inline-formula><mml:math id="M22" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> fluxes: only 4 out of the
26 Earth system models considered in Séférian et al. (2020) simulate
marine <inline-formula><mml:math id="M23" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> emissions.</p>
      <p id="d1e511">The last generation of Earth system models projects an enhanced ocean
warming in response to climate change, which is in turn expected to increase
upper-ocean stratification (Sallée et al., 2021) and to contribute to
greater reductions in upper-ocean nitrate and subsurface oxygen ventilation
(Kwiatkowski et al., 2020). Ocean warming and deoxygenation constitute two
triggers of high-probability high-impact climate tipping points (Heinze et
al., 2021) and are identified as two of the main environmental factors
influencing marine <inline-formula><mml:math id="M24" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> distributions (IPCC, 2019; Hutchins and Capone,
2022). Through its expected impacts on the upper-ocean stratification, the
PLF representation could further change the oceanic <inline-formula><mml:math id="M25" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> source by
modulating the mixing between <inline-formula><mml:math id="M26" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula>-rich water and intermediate depths,
perturbing the way <inline-formula><mml:math id="M27" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula>-rich water reaches the air–sea interface (Freing
et al., 2012).</p>
      <p id="d1e567">Here, we investigate how an incomplete representation of the PLF leads to
uncertainties in <inline-formula><mml:math id="M28" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> projection in an up-to-date global
ocean–biogeochemical model that makes up the current generation of Earth system
models. Section 2 describes the numerical model and the set of simulations,
as well as the existing options to consider CHL modulations of the incoming
shortwave radiation. Section 3 presents the effect of an interactive PLF on
the ocean heat content and associated ocean stratification and dynamics, as well as
its feedback on marine <inline-formula><mml:math id="M29" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> inventory. Finally, Sect. 4 summarizes the
main results, addresses their broader implications and discusses the future
work motivated by this study.</p>
</sec>
</sec>
<sec id="Ch1.S2">
  <label>2</label><title>Methodology</title>
<sec id="Ch1.S2.SS1">
  <label>2.1</label><title>Configuration of the global ocean–biogeochemical model</title>
      <p id="d1e612">Recent projections of future <inline-formula><mml:math id="M30" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> emissions that contribute to
intercomparison projects like CMIP6 are still based on Earth system models
with a low spatial resolution (Séférian et al., 2020). For the sake of
coherence with CMIP biogeochemical modelling efforts, in the following, we
use a global ocean–biogeochemical configuration of the NEMO-PISCESv2 model
(Madec and the NEMO System Team, 2008; Aumont et al., 2015) at 1<inline-formula><mml:math id="M31" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> horizontal resolution.
This model corresponds to the oceanic component of CNRM-ESM2-1
(Séférian et al., 2019) and is one of the few CMIP6-class models
that contributed to the global <inline-formula><mml:math id="M32" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> budget (Tian et al., 2020). Our
modelled ocean has 75 vertical levels, and the first level is at 0.5 m
depth. Vertical levels are unevenly spaced, with 35 levels being in the first
300 m of depth. Atmospheric forcings of momentum, incoming radiation,
temperature, humidity and freshwater are provided to the ocean surface by
bulk formulae following Large and Yeager (2009).  Details on physical
configuration are given in Berthet et al. (2019). Using an ocean-only
configuration allows the local response induced by the PLF to be isolated by not
confounding it with potential inter-basin feedbacks acting through the
atmosphere.</p>
      <p id="d1e650">JRA55-do atmospheric reanalysis (Tsujino et al., 2018, 2020)
provided the atmospheric forcings of the ocean. The global domain was first
spun-up under preindustrial conditions over several hundred years, ensuring
that all fields approached a quasi-steady state. The historical evolution of
atmospheric <inline-formula><mml:math id="M33" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M34" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> concentrations was prescribed from 1850.
To avoid the warming jump between the end of the spin-up and the onset of
the reanalyses in 1958, the first 5 years of JRA55-do forcings were cycled,
followed by the complete period of JRA55-do atmospheric forcing from 1958 to
2018.</p>
</sec>
<sec id="Ch1.S2.SS2">
  <label>2.2</label><title>Experimental design: three representations of the PLF</title>
      <p id="d1e685">The control simulation (hereafter REF) and the spin-up both
account for a fully interactive PLF: the penetration of shortwave radiation
into the ocean surface is constrained by the CHL concentration ([CHL])
produced by the PISCESv2 biogeochemical component (Fig. S1 in the Supplement, REF).</p>
      <p id="d1e688">PISCESv2 (Pelagic Interactions Scheme for Carbon and Ecosystem Studies v2)
is a 3D biogeochemical model which simulates the lower trophic levels of
marine ecosystems (nanophytoplankton, diatoms, microzooplankton and
mesozooplankton), as well as the biogeochemical cycles of carbon and of the main
nutrients (phosphate, nitrogen, iron and silicate) along the 75 levels of
our numerical ocean. A comprehensive presentation of the model is found in
Aumont et al. (2015). PISCESv2 simulates prognostic 3D distributions of
nanophytoplankton and diatom concentrations. The evolution of phytoplankton
biomasses is the net outcome of growth, mortality, aggregation and grazing
by zooplankton. The growth rate of phytoplankton mainly depends on the length of
the day, depths of the mixed layer and of the euphotic zone, and the mean
residence time of the cells within the unlit part of the mixed layer, and it
includes a generic temperature dependency (Eppley, 1972). Nanophytoplankton
growth depends on the external nutrient concentrations in nitrogen and
phosphate (Monod-like parameterizations of N and P limitations) and on Fe
limitation, which is modelled according to a classical quota approach. The
production terms for diatoms are defined as for nanophytoplankton, except
that the limitation terms also include silicate.</p>
      <p id="d1e691">Light absorption by phytoplankton depends on the waveband and on the species
(Bricaud et al., 1995). A simplified formulation of light absorption by the
ocean is used in our experiments to calculate both the phytoplankton light
limitation in PISCESv2 and the oceanic heating rate (Lengaigne et<?pagebreak page402?> al.,
2007). In this formulation, visible light is split into three wavebands:
blue (400–500 nm), green (500–600 nm) and red (600–700 nm); for each
waveband, the CHL-dependent attenuation coefficients, <inline-formula><mml:math id="M35" display="inline"><mml:mrow><mml:msub><mml:mi>k</mml:mi><mml:mi mathvariant="normal">R</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M36" display="inline"><mml:mrow><mml:msub><mml:mi>k</mml:mi><mml:mi mathvariant="normal">G</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and
<inline-formula><mml:math id="M37" display="inline"><mml:mrow><mml:msub><mml:mi>k</mml:mi><mml:mi mathvariant="normal">B</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, are derived from the formulation proposed in Morel and Maritorena
(2001):
          <disp-formula id="Ch1.E1" content-type="numbered"><label>1</label><mml:math id="M38" display="block"><mml:mrow><mml:msub><mml:mi>k</mml:mi><mml:mtext>WLB</mml:mtext></mml:msub><mml:mo>=</mml:mo><mml:msubsup><mml:mo>∑</mml:mo><mml:mrow><mml:msub><mml:mi mathvariant="italic">λ</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub></mml:mrow><mml:mrow><mml:msub><mml:mi mathvariant="italic">λ</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:msubsup><mml:mo mathsize="1.1em">(</mml:mo><mml:mi>k</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="italic">λ</mml:mi><mml:mo>)</mml:mo><mml:mo>+</mml:mo><mml:mi mathvariant="italic">χ</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="italic">λ</mml:mi><mml:mo>)</mml:mo><mml:mo>[</mml:mo><mml:mtext>CHL</mml:mtext><mml:msup><mml:mo>]</mml:mo><mml:mrow><mml:mi>e</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="italic">λ</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msup><mml:mo mathsize="1.1em">)</mml:mo><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
        where WLB means the wavelength band associated with red (R), green (G) or blue
(B) and bounded by the wavelengths <inline-formula><mml:math id="M39" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">λ</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M40" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">λ</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, as
detailed above. <inline-formula><mml:math id="M41" display="inline"><mml:mrow><mml:mi>k</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="italic">λ</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> is the attenuation coefficient for
optically pure sea water. <inline-formula><mml:math id="M42" display="inline"><mml:mrow><mml:mi mathvariant="italic">χ</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="italic">λ</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M43" display="inline"><mml:mrow><mml:mi>e</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="italic">λ</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> are fitted coefficients which allow the attenuation
coefficients due to chlorophyll pigments in sea water to be determined (Morel and Maritorena,
2001).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F1" specific-use="star"><?xmltex \currentcnt{1}?><?xmltex \def\figurename{Figure}?><label>Figure 1</label><caption><p id="d1e864">Modelled tropical [35<inline-formula><mml:math id="M44" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> S–35<inline-formula><mml:math id="M45" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N] heat content
of upper 300 m (OHC300; in 10<inline-formula><mml:math id="M46" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">21</mml:mn></mml:msup></mml:math></inline-formula> J (hereafter ZJ) for each simulation described in Table 1: REF
(black; empty stars), climZCST (green; full downward triangles) and climZVAR
(blue; empty rightward triangles). In <bold>(a)</bold>, the final part of the spin-up has been
added in grey to illustrate the branching protocol in year 1999, and OHC300
anomalies have been computed with respect to year 1999. Subplot <bold>(b)</bold> zooms
over the Argo period to compare modelled tropical OHC300 anomalies with three in-situ-based products (see Sect. 2.3).</p></caption>
        <?xmltex \igopts{width=398.338583pt}?><graphic xlink:href="https://esd.copernicus.org/articles/14/399/2023/esd-14-399-2023-f01.png"/>

      </fig>

      <p id="d1e906">At year 1999, two sensitivity experiments were branched off (Fig. 1). Both
simulations climZCST and climZVAR account for an incomplete and external
PLF, as they consider an observed climatology of surface [CHL] from ESACCI
(Valente et al., 2016) in order to compute the light penetration into sea
water (Eq. 1 and Fig. S1). These two simulations differ from each other
in terms of the “realism” of the vertical profile derived in each grid point from the
surface value of the ESACCI CHL climatology to the level of light extinction
(Table 1). climZCST uses constant profiles of CHL spreading uniformly in the
vertical direction (Fig. 2b and d–f). climZVAR uses variable vertical
profiles computed following Morel and Berthon (1989; Fig. 2c and d–f).
This set of simulations is representative of the several configurations used
in the case of CMIP intercomparison project.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T1" specific-use="star"><?xmltex \currentcnt{1}?><label>Table 1</label><caption><p id="d1e912">Experimental set-up.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="3">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="justify" colwidth="350pt"/>
     <oasis:colspec colnum="3" colname="col3" align="left"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Simulation</oasis:entry>
         <oasis:entry colname="col2">Which CHL fields interact with incoming shortwave radiation?</oasis:entry>
         <oasis:entry colname="col3">PLF nature</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">REF</oasis:entry>
         <oasis:entry colname="col2">Uses directly the 3D CHL produced by the biogeochemical component</oasis:entry>
         <oasis:entry colname="col3">Interactive</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">climZCST</oasis:entry>
         <oasis:entry colname="col2">Uses the prescribed monthly climatology of ESACCI CHL with a constant vertical profile equal to the value of the surface climatology up to the level of light extinction</oasis:entry>
         <oasis:entry colname="col3">Incomplete</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">climZVAR</oasis:entry>
         <oasis:entry colname="col2">Uses the prescribed monthly climatology of ESACCI CHL with a variable vertical profile derived from the surface climatology following Morel and Berthon (1989)</oasis:entry>
         <oasis:entry colname="col3">Incomplete</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table><?xmltex \gdef\@currentlabel{1}?></table-wrap>

      <p id="d1e980">In climZCST and climZVAR, PISCESv2 prognostically simulates [CHL], a key
component of biogeochemical cycles, but feedback of CHL on physics
(stratification, ocean heat content) is determined by the externally
prescribed [CHL] climatology. The CHL concentrations used for radiation or
for biogeochemical cycles are not consistent, and phytoplankton biomass
computed by the biogeochemical model does not affect the physical properties
of the ocean waters.</p>
      <p id="d1e983">Consequences for the marine biogeochemical mean state of incomplete
representations of the PLF are assessed in the following by means of difference to
the control run REF. This methodology allows one to evaluate how different
levels of realism and complexity in resolving bio-physical interactions
impact the physical and biogeochemical content of the modelled ocean. A
complete description of the marine <inline-formula><mml:math id="M47" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> parameterization used in this
model is presented in the supplementary material.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F2" specific-use="star"><?xmltex \currentcnt{2}?><?xmltex \def\figurename{Figure}?><label>Figure 2</label><caption><p id="d1e1002">CHL concentration (<inline-formula><mml:math id="M48" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">mg</mml:mi><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mi mathvariant="normal">CHL</mml:mi><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msup><mml:mi mathvariant="normal">m</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>) interacting with the incoming
shortwave radiation for each numerical experiment (Table 1). Maps <bold>(a–c)</bold> show
annual means of the vertical sum over 0–6000 m, <bold>(a)</bold> as modelled over the
2009–2018 period for REF, and its differences in relation to the external CHL
prescribed for <bold>(b)</bold> climZCST and <bold>(c)</bold> climZVAR experiments. Labels P1 to P3 on
subplot <bold>(a)</bold> locate vertical profiles shown on subplots <bold>(d–f)</bold>.</p></caption>
        <?xmltex \igopts{width=369.885827pt}?><graphic xlink:href="https://esd.copernicus.org/articles/14/399/2023/esd-14-399-2023-f02.png"/>

      </fig>

</sec>
<sec id="Ch1.S2.SS3">
  <label>2.3</label><title>Observations and analyses</title>
      <p id="d1e1058">Model results are compared with available observation-based gridded
temperature and salinity datasets. Ocean heat content (OHC) of the upper
0–300 m layer was inferred from three different products: (i) the global
objective analysis of subsurface temperature EN4 (Good et al., 2013), (ii)
the SIO product of the Scripps Institution of Oceanography (Roemmich and
Gilson, 2009), and (iii) the ISAS20 optimal interpolation product released by
Ifremer (Kolodziejczyk et al., 2019, 2021). While the
SIO and ISAS20 products consider only Argo temperature and salinity
profiles, the EN4 dataset considers all types of in situ profiles providing
temperature and salinity (when available). These three in-situ-based datasets are
considered from 2005, the year the Argo coverage became sufficient to
characterize the global ocean. Details on OHC computation are given in
Llovel and Terray (2016) and Llovel et al. (2022). The authors also refer to
cross-validations of OHC of deeper layers (0–700 and 0–2000 m) against OHC
anomalies from the World Ocean Atlas 2009 (Levitus et al., 2012). A monthly
climatology (1955–2012) of oceanic temperature from the World Ocean Atlas 2013
version 2 (Locarnini et al., 2013) was used to evaluate modelled
temperatures. Modelled <inline-formula><mml:math id="M49" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> was compared to the annual climatology of
<inline-formula><mml:math id="M50" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> from the World Ocean Atlas 2013 (Garcia et al., 2014), and modelled CHL
was compared to the 3D monthly climatological global product estimated from the
merged satellite and hydrological data of Uitz et al. (2006). Modelled
<inline-formula><mml:math id="M51" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> partial pressure difference across the air–sea interface (Dpn2o)
was compared to the recent dataset of Dpn2o observations compiled by Yang et
al. (2020).</p>
      <p id="d1e1096">In the following, temporal means cover the last 10 years of simulations, from
2009 to 2018. In other analyses, the whole simulated period is shown
(1999–2018).</p>
</sec>
</sec>
<sec id="Ch1.S3">
  <label>3</label><title>Results</title>
<sec id="Ch1.S3.SS1">
  <label>3.1</label><title>Impact of PLF on the upper-ocean heat content and dynamics</title>
      <p id="d1e1115">Meridional sections reveal that heat perturbations in response to changing
CHL fields that interact with light are limited to the top 0–300 m layer of
the ocean and predominantly affect the tropical area (Figs. 3 and S2c and d in the Supplement).</p>
      <p id="d1e1118">The largest temperature anomalies are observed near the thermocline depth
and reflect upper-ocean warming and deepening of the thermocline in climZCST
(Fig. 3c) and cooling and shallowing of the thermocline in climZVAR
(Fig. 3d). In climZCST, the ocean warming reflects large-scale patterns of
a tropical CHL deficit compared to REF (Fig. 2b). Temperature
differences are lower in the near-surface layer (0–50 m) than in the 50–300 m layer. This is expected as a result of weak stratification but also of
simulations run with a forced atmosphere, in which the temperature of the
ocean surface layer is constrained by the atmospheric prescribed state.</p>
      <p id="d1e1121">When using an incomplete representation of the PLF, two contrasting trends
of the upper-ocean heat content (OHC) emerge compared to our control run REF
(Fig. 1a). Over the Argo period (2005–present), EN4 estimates of tropical
OHC300 are in very good agreement with our warmest simulation, climZCST
(Fig. 1b), while the two other data<?pagebreak page403?> products, SIO and ISAS20, are in better
agreement with our control run REF and with climZVAR. The good accordance
between modelled OHC300 and observations is not a systematic feature of
model–data comparisons (Cheng et al., 2016; Liao et al., 2022). Moreover,
non-negligible differences exist among OHC data products; these differences are generally
particularly strong in the upper 0–300 m layer (Lyman et al., 2010; Liang et
al., 2021). The spread between these products at the end of the 2005–2018
period (<inline-formula><mml:math id="M52" display="inline"><mml:mrow><mml:mn mathvariant="normal">12.1</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">21</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> J) is comparable to that of our numerical set (<inline-formula><mml:math id="M53" display="inline"><mml:mrow><mml:mn mathvariant="normal">13.6</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">21</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> J). The modelled OHC in REF is in very good agreement with current
global mean in situ observations (Meyssignac et al., 2019; see their Fig. 11) and
with OHC anomalies derived from the World Ocean Atlas 2009 (Levitus et al.,
2012). In accordance with these observations, our ocean–biogeochemical model
simulates a global mean increase of OHC over the 2006–2016 period of the order
<inline-formula><mml:math id="M54" display="inline"><mml:mrow><mml:mn mathvariant="normal">40</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">21</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> J for the upper 700 m and of about <inline-formula><mml:math id="M55" display="inline"><mml:mrow><mml:mn mathvariant="normal">70</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">21</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> J for the
0–2000 m layer.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F3" specific-use="star"><?xmltex \currentcnt{3}?><?xmltex \def\figurename{Figure}?><label>Figure 3</label><caption><p id="d1e1187">Mean 2009–2018 meridional section of temperature (<inline-formula><mml:math id="M56" display="inline"><mml:mrow class="unit"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup><mml:mi mathvariant="normal">C</mml:mi></mml:mrow></mml:math></inline-formula>) averaged over 0–360<inline-formula><mml:math id="M57" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> E for <bold>(a)</bold> observations and <bold>(b)</bold> REF and its differences in relation to <bold>(c)</bold> climZCST and <bold>(d)</bold> climZVAR.</p></caption>
        <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://esd.copernicus.org/articles/14/399/2023/esd-14-399-2023-f03.png"/>

      </fig>

      <p id="d1e1230">Subsurface thermal anomalies develop rapidly (Fig. S3 in the Supplement) after branching of
climZVAR and climZCST in 1999. The dipole structure of the anomaly seen in
climZCST reflects the surface heat trapping in REF and the associated
subsurface cooling (Fig. S3b). Indeed, in climZCST, the vertically
constant and weaker concentrations of CHL trap less incoming shortwave than
the CHL maximum seen in REF between 0 and 100 m depth (Fig. 2d–f). The
negative anomaly in climZVAR suggests that the parameterization of Morel and
Berthon (1989) contributes to an underestimation of the ocean heat uptake (Figs. S3c and S2d) compared to REF. This heat deficit results from the
overestimation of the vertical integral of CHL over large areas of the
tropical domain in climZVAR compared to REF (Fig. 2c). As a result, the
energy associated with the incoming radiation is caught in surface waters
without being distributed over the water column.</p>
      <p id="d1e1233">In both climZCST and climZVAR, the subsurface temperature anomaly deepens
progressively over the first 6 years of simulation as a result of vertical
mixing (Fig. S3). This evolution indicates that part of the OHC300
differences between simulations comes from the adjustment of climZCST and
climZVAR to the spin-up mean state yielded by an interactive PLF. It can be
expected that experiments that have spin-ups run with different representations
of the PLF would give even stronger sensitivities than those highlighted in
this study. The sensitivities of OHC300 to the PLF formulation evaluated
here should be considered at the lower end of the estimate of OHC discrepancies
that may emerge from changing the PLF representation.</p>
      <?pagebreak page404?><p id="d1e1236">Prescribing a constant vertical profile of CHL (climZCST) to compute the
penetration of the radiation into the ocean increases the OHC300 by more
than <inline-formula><mml:math id="M58" display="inline"><mml:mrow><mml:mn mathvariant="normal">20</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">21</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> J during the last 2 decades (1999–2018) compared to REF
(Fig. 1). This rise of OHC300 decreases the vertically integrated tropical
potential density of the upper 300 m at the end of the simulated period by 5 <inline-formula><mml:math id="M59" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">kg</mml:mi><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi mathvariant="normal">m</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> compared to REF (Fig. S4 in the Supplement). The opposite trend (a reduced OHC300
compared to REF) is simulated with the same state-of-the-art CMIP6
ocean–biogeochemical model when considering a variable vertical profile of
CHL (climZVAR). However, Fig. 1 highlights that the simulation using a
consistent CHL for interacting with both incoming shortwave radiation and
biogeochemical cycling (REF) does not amplify one of these two trends, as
climZCST and climZVAR surround REF. Average ranges of uncertainties
associated with the PLF representation over the extended tropical domain
(35<inline-formula><mml:math id="M60" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> S–35<inline-formula><mml:math id="M61" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N) exceed <inline-formula><mml:math id="M62" display="inline"><mml:mrow><mml:mn mathvariant="normal">40</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">21</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> J in terms of OHC300
(Fig. 1), 4 m for the thermocline depth and more than 9 <inline-formula><mml:math id="M63" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">kg</mml:mi><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi mathvariant="normal">m</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>
for the vertically integrated potential density perturbation (Fig. S4).</p>
      <p id="d1e1322">Similar to OHC300, ranges of uncertainty for the OHC estimates of deeper
layers (0–700 and 0–2000 m) also slightly exceed <inline-formula><mml:math id="M64" display="inline"><mml:mrow><mml:mn mathvariant="normal">40</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">21</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> J. Such
uncertainty ranges are quite important, as they are obtained by only changing
the PLF representation in a single ocean–biogeochemical model. By comparison
and in the context of OMIP protocols, Tsujino et al. (2020) give spreads
between CMIP model estimates of the order of <inline-formula><mml:math id="M65" display="inline"><mml:mrow><mml:mn mathvariant="normal">50</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">21</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> J for the OHC of
the upper 700 m after 20 years (please refer to their Fig. 24a and b).
Regarding the OHC integrated over the 0–2000 m layer, they report an
inter-model spread between 50 and <inline-formula><mml:math id="M66" display="inline"><mml:mrow><mml:mn mathvariant="normal">100</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">21</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> J, depending on the OMIP
protocol considered (see their Fig. 24d and e). The OHC300 uncertainty of <inline-formula><mml:math id="M67" display="inline"><mml:mrow><mml:mn mathvariant="normal">40</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">21</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> J triggered by the representation of the PLF in our set of
simulations has a comparable order of magnitude in relation to the current spread of
multi-model estimations of OHC. The present study suggests that part of the
OHC multi-model uncertainty in current climate models may be due to
different representations of the phytoplankton–light interaction.</p>
      <p id="d1e1385">The heat and associated density perturbations also cause dynamical
modifications of upper-ocean currents (Fig. 4).<?pagebreak page405?> Absolute differences in
upper-ocean velocities (average between 0 and 300 m depth) are between
<inline-formula><mml:math id="M68" display="inline"><mml:mrow><mml:mo>|</mml:mo><mml:mn mathvariant="normal">0.05</mml:mn><mml:mo>|</mml:mo></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M69" display="inline"><mml:mrow><mml:mo>|</mml:mo><mml:mn mathvariant="normal">0.6</mml:mn><mml:mo>|</mml:mo></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M70" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">cm</mml:mi><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>, with the strongest
differences along the Equator revealing perturbations of the equatorial
undercurrent (Fig. 4b and c). Circulation around the subtropical gyres
is also impacted, particularly for the South Pacific subtropical gyre.
These modifications of zonal and meridional dynamics spread over the entire
tropical latitudes, from 30<inline-formula><mml:math id="M71" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> S to 30<inline-formula><mml:math id="M72" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N, strongly
supporting the idea that heat perturbations induced by different
interactions between CHL and incoming shortwave cause non-negligible
modifications of the equatorial and tropical ocean dynamics.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F4"><?xmltex \currentcnt{4}?><?xmltex \def\figurename{Figure}?><label>Figure 4</label><caption><p id="d1e1450">Annual mean speed (colour; <inline-formula><mml:math id="M73" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">cm</mml:mi><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>) and streamlines of oceanic
currents between 0–300 m over the 2009–2018 period for <bold>(a)</bold> REF and its
differences in relation to <bold>(b)</bold> climZCST and <bold>(c)</bold> climZVAR. In
<bold>(b)</bold> and <bold>(c)</bold>, streamlines are
coloured when absolute speed are larger than 0.05 <inline-formula><mml:math id="M74" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">cm</mml:mi><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>.</p></caption>
        <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://esd.copernicus.org/articles/14/399/2023/esd-14-399-2023-f04.png"/>

      </fig>

</sec>
<sec id="Ch1.S3.SS2">
  <label>3.2</label><?xmltex \opttitle{PLF impact on {$\protect\chem{N_{{2}}O}$} production}?><title>PLF impact on <inline-formula><mml:math id="M75" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> production</title>
      <p id="d1e1531">Perturbations of the annual pycnocline depth (Fig. 5a–c) highlight a
vertical adjustment to the heat (Fig. S2) and subsequent large-scale
dynamical anomalies (Fig. 4). Variations of the pycnocline integrate
perturbations of both thermal and salinity stratifications. However, in our
simulations, heat anomalies appear to drive perturbations, and pycnocline
depth anomalies mainly reflect those of the thermocline. The cold anomaly
dominating the tropical domain in climZVAR (Fig. S2d) appears to be
vertically redistributed, as it triggers an upward displacement of the
isopycnals (Fig. 5c). In contrast to the anomalies seen over most of the
tropical Pacific, a deepening of the isopycnals reaching up to 20 m is
modelled in both the South Pacific and Atlantic subtropical gyres in climZCST
and climZVAR (Fig. 5b and c). Over these subtropical gyres, heat is redistributed vertically as the subsurface warm anomaly dives. The
subduction of these heat anomalies causes, in turn, a deepening of the
pycnocline (Fig. 5b and c). As stressed by Sweeney et al. (2005), small
changes in CHL concentration (Fig. S5 in the Supplement) may have important effects on the
mixed-layer depth in these subtropical gyres due to low local wind speeds
and low mixing conditions. This is thought to explain the large sensitivity
we observe in terms of pycnocline depth (Fig. 5) and ocean<?pagebreak page406?> heat content in
these regions. In line with their results, our set of simulations highlights
that small CHL changes in low-productivity regions trigger a vertical
redistribution of density anomalies, affecting the stratification.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F5" specific-use="star"><?xmltex \currentcnt{5}?><?xmltex \def\figurename{Figure}?><label>Figure 5</label><caption><p id="d1e1536"><bold>(a–c)</bold> Depth of annual pycnocline (m) for 2009–2018 computed as the
annual mean depth of the maximum of the Brunt–Väisälä frequency
N<inline-formula><mml:math id="M76" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:math></inline-formula>(T, S) over the water column (Maes and O'Kane, 2014). <bold>(d–f)</bold> Mean
[<inline-formula><mml:math id="M77" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula>] (<inline-formula><mml:math id="M78" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi><mml:mi mathvariant="normal">mol</mml:mi><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mi mathvariant="normal">N</mml:mi><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msup><mml:mi mathvariant="normal">m</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>) over the first 300 m depth. For REF
<bold>(a, d)</bold> and its mean-state differences in relation to climZCST
<bold>(b, e)</bold>
and climZVAR <bold>(c, f)</bold>.</p></caption>
        <?xmltex \igopts{width=483.69685pt}?><graphic xlink:href="https://esd.copernicus.org/articles/14/399/2023/esd-14-399-2023-f05.png"/>

      </fig>

      <p id="d1e1604">Anomalies of <inline-formula><mml:math id="M79" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> concentration integrated over the first 300 m of
the water column (Fig. 5e and f) are in good agreement with patterns of
pycnocline anomalies over the tropics (Fig. 5b and c). These comparable
spatial structures attest that <inline-formula><mml:math id="M80" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> anomalies are driven by
perturbations of stratification in large parts of the tropical domain.</p>
      <p id="d1e1634">In the South Pacific subtropical gyre, the concomitance of (i) an increased
temperature (Fig. S2c and d), (ii) a reinforced transport (Fig. 4b
and c) and (iii) a weakened stratification illustrated by a local deepening
of the pycnocline (Fig. 5b and c) contributes to decreasing the <inline-formula><mml:math id="M81" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula>
concentration in both climZCST and climZVAR (Fig. 5e and f). In
contrast, in the South Indian Ocean and North tropical Atlantic, the increase
of <inline-formula><mml:math id="M82" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> concentration seems to be mainly driven by the mean shoaling of
the local pycnocline, as both regions exhibit contrasted perturbations in
terms of transport and temperature. Finally, in the North Pacific oxygen-minimum zone, the strong <inline-formula><mml:math id="M83" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> deficits in both climZCST and climZVAR
compared to REF do not respond to stratification and transport anomalies but
are rather driven by a local rise of <inline-formula><mml:math id="M84" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentration (Fig. S6 in the Supplement). Indeed, considering an incomplete PLF in climZCST and climZVAR contributes to an overestimation of the oxygen
concentration in this oxygen-minimum zone and leads to a lack of local
<inline-formula><mml:math id="M85" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> production.</p>
      <p id="d1e1700">The relationship between <inline-formula><mml:math id="M86" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> concentration and OHC300 in the Tropical
Ocean is derived from a linear regression for each of the three 20-year
simulations (Fig. 6). The resulting slopes allow one to identify three
distinct tropical <inline-formula><mml:math id="M87" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> production pathways along time as a function of
the oceanic heat uptake: from 0.3 <inline-formula><mml:math id="M88" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi><mml:mi mathvariant="normal">mol</mml:mi><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mi mathvariant="normal">N</mml:mi><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi mathvariant="normal">m</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> per ZJ for the most
simplified PLF scenario climZCST to 1 <inline-formula><mml:math id="M89" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi><mml:mi mathvariant="normal">mol</mml:mi><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi mathvariant="normal">N</mml:mi><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi mathvariant="normal">m</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> per ZJ for
climZVAR. The slope of the simulation with the higher level of realism in
terms of interactivity (REF) appears to be a solution between the two previous
extremes, as it increases its <inline-formula><mml:math id="M90" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> production by 0.8 <inline-formula><mml:math id="M91" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi><mml:mi mathvariant="normal">mol</mml:mi><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi mathvariant="normal">N</mml:mi><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msup><mml:mi mathvariant="normal">m</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>
per ZJ. Each of these <inline-formula><mml:math id="M92" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> production pathways will translate into a
different temporal evolution of the <inline-formula><mml:math id="M93" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> budget and, hence, future
climate. This result stresses the importance of having an interactive PLF in
order to neither overestimate nor underestimate the <inline-formula><mml:math id="M94" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> production
projections due to a simplified representation of the PLF.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F6"><?xmltex \currentcnt{6}?><?xmltex \def\figurename{Figure}?><label>Figure 6</label><caption><p id="d1e1850">Annual <inline-formula><mml:math id="M95" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> inventory vertically integrated over the first
300 m depth (<inline-formula><mml:math id="M96" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi><mml:mi mathvariant="normal">mol</mml:mi><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi mathvariant="normal">N</mml:mi><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msup><mml:mi mathvariant="normal">m</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>) as a function of the annual OHC300 (ZJ)
and averaged over an extended tropical domain (35<inline-formula><mml:math id="M97" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> S–35<inline-formula><mml:math id="M98" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N). All points reflect anomalies compared to year 1999.</p></caption>
        <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://esd.copernicus.org/articles/14/399/2023/esd-14-399-2023-f06.png"/>

      </fig>

</sec>
<sec id="Ch1.S3.SS3">
  <label>3.3</label><?xmltex \opttitle{Impacts on oceanic {$\protect\chem{N_{{2}}O}$} emissions}?><title>Impacts on oceanic <inline-formula><mml:math id="M99" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> emissions</title>
      <p id="d1e1934">By perturbing the OHC, the ocean dynamics and the <inline-formula><mml:math id="M100" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> production, the
way PLF is modelled has non-negligible consequences on Dpn2o and thus on
<inline-formula><mml:math id="M101" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> emissions at the air–sea interface (Fig. 7). Because the
atmospheric partial pressure of <inline-formula><mml:math id="M102" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> is identical among simulations,
differences in Dpn2o are driven by changes in surface oceanic <inline-formula><mml:math id="M103" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula>
concentration and normalized by those in <inline-formula><mml:math id="M104" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> solubility. Since solubility
is mainly driven by temperature and because surface temperature anomalies
are very weak (Fig. S3c and d), we do not expect solubility
perturbations close to the surface. It results that spatial patterns of
Dpn2o anomalies (Fig. 7) reflect differences in surface oceanic <inline-formula><mml:math id="M105" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula>
concentration.</p>
      <p id="d1e2016">Compared to a scenario considering a fully interactive PLF (REF), an
incomplete representation of the PLF underestimates Dpn2o in all oxygen-minimum zones of the Northern Hemisphere, which are strong emission zones
(Fig. 7c and d). Large Dpn2o anomalies of <inline-formula><mml:math id="M106" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>2.5 natm encompass northern
parts of the oxygen-minimum zones of the Indian, Pacific and Atlantic oceans,
and anomalies reach up to <inline-formula><mml:math id="M107" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>5 natm locally. Consequently, climZCST and
climZVAR underestimate <inline-formula><mml:math id="M108" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> fluxes by more than 12 % in these oxygen-minimum regions compared to REF. This result highlights that the
representation of the PLF can be an important source of uncertainty in
modelling <inline-formula><mml:math id="M109" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> fluxes. As a matter of fact, the oceanic contribution to
the recent global <inline-formula><mml:math id="M110" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> budget by Tian et al. (2020) is based on only
five global ocean–biogeochemical models (as, still, only a few models simulate
marine <inline-formula><mml:math id="M111" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> emissions). These models have different configurations of
the PLF, which adds considerable uncertainty to simulated marine <inline-formula><mml:math id="M112" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula>
emissions.</p>
      <?pagebreak page407?><p id="d1e2099"><?xmltex \hack{\newpage}?>In subtropical gyres, the strong and direct effect of temperature (Fig. S2c and d) on in-depth <inline-formula><mml:math id="M113" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> concentration (Fig. 5e and f) is in
line with Yang et al. (2020), who demonstrate that the seasonality of Dpn2o
in those regions is driven by a solubility regime. Both climZCST and climZVAR
overestimate Dpn2o in subtropical gyres of the South Pacific and South
Atlantic (Fig. 7c and d). This leads to an overestimation of the
regional <inline-formula><mml:math id="M114" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> fluxes by 24 % compared to a simulation that has a
complete and interactive PLF representation (REF).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F7"><?xmltex \currentcnt{7}?><?xmltex \def\figurename{Figure}?><label>Figure 7</label><caption><p id="d1e2132">Mean sea-to-air Dpn2o (natm) computed from <bold>(a)</bold> observations and <bold>(b)</bold> REF
over the 2009–2018 period and its differences in relation to <bold>(c)</bold> climZCST and <bold>(d)</bold>
climZVAR.</p></caption>
        <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://esd.copernicus.org/articles/14/399/2023/esd-14-399-2023-f07.png"/>

      </fig>

</sec>
</sec>
<sec id="Ch1.S4" sec-type="conclusions">
  <label>4</label><title>Discussion and conclusion</title>
      <p id="d1e2163">In this study, we use the ocean component (including ocean physics, sea ice
and marine biogeochemistry) of the global Earth system model CNRM-ESM2-1,
which contributed to the last phase of the Coupled Model Intercomparison
Project (CMIP6). Our ocean–biogeochemical model is one of the few currently
able to represent an interactive phytoplankton–light feedback (PLF) by
constraining the penetration of shortwave radiation into the ocean as a
function of the CHL concentration produced by the biogeochemical model.
Three simulations have been run at the horizontal resolution currently used
for intercomparisons of Earth system models (1<inline-formula><mml:math id="M115" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>). Analyses are
based on differences between a control run with an interactive PLF (REF) and
two experiments with an incomplete PLF (climZCST and climZVAR) using a
prescribed CHL climatology to interact with the incoming solar radiation.
Changing the approach to compute how CHL<?pagebreak page408?> filters the light penetrating into
the ocean highlights the consequences of using an interactive PLF.</p>
      <p id="d1e2175">Our results demonstrate that the approach commonly used to account for the
impact of the phytoplankton on light penetration significantly interferes
with upper-ocean heat uptake (Fig. 1), as well as with the associated dynamics (Fig. 4)
and stratification in the tropics (Fig. 5a–c). Our set of forced
ocean–biogeochemical simulations reveals that marine production of nitrous
oxide (<inline-formula><mml:math id="M116" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula>) is sensitive to the representation of the PLF (Fig. 5d–f). The heat perturbations add to the uncertainty of modelled oceanic
<inline-formula><mml:math id="M117" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> production and result in three <inline-formula><mml:math id="M118" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> production trajectories
along time (Fig. 6) that, in turn, trigger regional differences of Dpn2o and
sea–air <inline-formula><mml:math id="M119" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> fluxes (Fig. 7). Compared to an ocean model using a fully
interactive PLF (REF), an incomplete PLF results in an overestimation of
<inline-formula><mml:math id="M120" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> fluxes of up to 24 % in the South Pacific and South Atlantic
subtropical gyres and in a reduction of up to 12 % in oxygen-minimum zones
of the Northern Hemisphere. Our results based on a state-of-the-art CMIP6 model emphasize an overlooked, important source of uncertainty in
climate projections of marine <inline-formula><mml:math id="M121" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> production and in current estimations
of the marine nitrous oxide budget.</p>
      <p id="d1e2257">In subtropical gyres of the Southern Hemisphere, which are regions of low
productivity, small CHL changes have a strong and direct effect on
temperature (Fig. S2c and d), transport (Fig. 4b and c) and local
stratification (Fig. 5b and c). These concomitant effects result in a
local decrease of <inline-formula><mml:math id="M122" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> concentrations in both experiments with a
simplified PLF representation (climZCST and climZVAR).</p>
      <p id="d1e2273">In forced ocean simulations, atmospheric forcings constrain surface
temperature, salinity and, thus, solubility. However, the <inline-formula><mml:math id="M123" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula>
concentration integrated over the upper 300 m depth of the water column
(Fig. 5e and f) showed differences in relation to the control run that follow those of
the in-depth temperature (Fig. S2c and d): in climZCST (climZVAR), a warmer
(colder) tropical ocean leads to a decreased (an increased) <inline-formula><mml:math id="M124" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula>
concentration. Because higher marine greenhouse gas emissions will increase
the temperature of the coupled atmosphere–ocean system, adding an
interactive atmospheric component is expected to amplify the PLF-induced
mean changes in marine <inline-formula><mml:math id="M125" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> concentration highlighted in this ocean-only
numerical set (Park et al., 2014; Asselot et al., 2022).</p>
      <p id="d1e2316">Our results also question the reliability of current modelled estimates of
the area and volume of oxygen-minimum zones, as well as of their trends in a
future climate. The expansion rate of <inline-formula><mml:math id="M126" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>-depleted waters still remains
unclear, and its controlling mechanisms are not yet fully understood and
represented in today's models. Observation-based assessments suggested that
the ocean has already lost around 2 % of the global marine oxygen since
1960 (Schmidtko et al., 2017). The expansion of oxygen-minimum zones is
expected to result in an increase of the volume of suboxic water and to have
an impact on the production and decomposition of <inline-formula><mml:math id="M127" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> (Freing et al.,
2012). Our set of simulations highlights that an incomplete representation
of the PLF underestimates the expansion of oxygen-depleted waters over the
20 years of simulation in comparison to REF. In climZCST and climZVAR, the
global volume (0–1000 m) of hypoxic water with [<inline-formula><mml:math id="M128" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>] under 50 <inline-formula><mml:math id="M129" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">mmol</mml:mi><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi mathvariant="normal">m</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> is up to <inline-formula><mml:math id="M130" display="inline"><mml:mrow><mml:mn mathvariant="normal">2.3</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">14</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M131" display="inline"><mml:mrow class="unit"><mml:msup><mml:mi mathvariant="normal">m</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> lower in 2018 compared to that of
the control run REF. Thus, an incomplete representation of the PLF might lead
to an underestimation of 1.2 % of the modelled tropical volume of
low-oxygenated waters after 20 years.</p>
      <p id="d1e2398">Recent regional studies demonstrated that the interactive PLF strongly
affects upwelling systems of the South Pacific and Atlantic oceans
(Hernandez et al., 2017; Echevin et al., 2021). Coastal upwellings are known
to be sites of high <inline-formula><mml:math id="M132" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> production, with an annual <inline-formula><mml:math id="M133" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> flux
amounting to approximately 20 % of the global fluxes, while these systems
occupy less than 3 % of the ocean area (Yang et al., 2020). However, in
the present study, the main modelled perturbations are rather localized over
oxygen-minimum zones or subtropical gyres (Figs. 5 and 7). While the
latter regional studies were performed at horizontal resolutions compatible
with the<?pagebreak page409?> complex dynamics of coastal upwellings (from 10 to about 28 km),
the resolution of climate models (<inline-formula><mml:math id="M134" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M135" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> horizontal
resolution) does not allow these dynamics to be resolved. A step further would
be to evaluate how the sensitivity of <inline-formula><mml:math id="M136" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> emissions to the
representation of the PLF depends on the horizontal resolution by running
simulations at a higher resolution with the same climate model. This would
help to better determine how coastal upwelling systems may impact the
modelled <inline-formula><mml:math id="M137" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> inventory through different PLF representations, as well
as the associated modelled range of uncertainty.</p>
</sec><notes notes-type="codeavailability"><title>Code availability</title>

      <p id="d1e2474">Sources for NEMO 3.6 and PISCESv2 code are available online at <uri>https://forge.nemo-ocean.eu/nemo</uri> (Madec and the NEMO System Team, 2008; Aumont et al., 2015).</p>
  </notes><notes notes-type="dataavailability"><title>Data availability</title>

      <p id="d1e2483">EN4 global objective analysis of subsurface temperature is released by Met Office Hadley
Centre with the following DOI:
<ext-link xlink:href="https://doi.org/10.1002/2013JC009067" ext-link-type="DOI">10.1002/2013JC009067</ext-link>, and it is available online at
<uri>https://hadleyserver.metoffice.gov.uk/en4/download-en4-2-2.html</uri> (Good et al., 2013). The SIO product is released by the Scripps
Institution of Oceanography with the following DOI:
<ext-link xlink:href="https://doi.org/10.1016/j.pocean.2009.03.004" ext-link-type="DOI">10.1016/j.pocean.2009.03.004</ext-link>, and it is available online at <uri>https://sio-argo.ucsd.edu/RG_Climatology.html</uri> (Roemmich and Gilson, 2009). The ISAS20 optimal interpolation product is released by Ifremer
with the following DOI: <ext-link xlink:href="https://doi.org/10.17882/52367" ext-link-type="DOI">10.17882/52367</ext-link>, and it is available online at
<uri>https://www.seanoe.org/data/00412/52367/</uri> (Kolodziejczyk et al., 2019, 2021). The last access date of these datasets was in February 2022.</p>
  </notes><app-group>
        <supplementary-material position="anchor"><p id="d1e2505">The supplement related to this article is available online at: <inline-supplementary-material xlink:href="https://doi.org/10.5194/esd-14-399-2023-supplement" xlink:title="pdf">https://doi.org/10.5194/esd-14-399-2023-supplement</inline-supplementary-material>.</p></supplementary-material>
        </app-group><notes notes-type="authorcontribution"><title>Author contributions</title>

      <p id="d1e2514">SB, JJ and RS conceptualized this study and its methodology. SB designed the
numerical experiments, carried them out and prepared the paper with
contributions from all co-authors. WL processed OHC data.</p>
  </notes><notes notes-type="competinginterests"><title>Competing interests</title>

      <p id="d1e2520">At least one of the (co-)authors is a member of the editorial board of <italic>Earth System Dynamics</italic>. The peer-review process was guided by an independent editor, and the authors also have no other competing interests to declare.</p>
  </notes><notes notes-type="disclaimer"><title>Disclaimer</title>

      <p id="d1e2529">Publisher's note: Copernicus Publications remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.</p>
  </notes><ack><title>Acknowledgements</title><p id="d1e2535">The OHC data were collected and made freely available by the International
Argo Program and the national programmes that contribute to it.
The Argo Program is part of the Global Ocean Observing System.  The authors thank the two reviewers
for their constructive comments and suggestions.</p></ack><notes notes-type="financialsupport"><title>Financial support</title>

      <p id="d1e2540">This project has
received funding from the European Union's Horizon 2020 research and
innovation programme under grant agreement no. 101003536 (ESM2025 – Earth
System Models for the Future).</p>
  </notes><notes notes-type="reviewstatement"><title>Review statement</title>

      <p id="d1e2546">This paper was edited by Jadranka Sepic and reviewed by Rémy Asselot and Zarko Kovac.</p>
  </notes><ref-list>
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